Table 1. Primers and probe used in this study

Genomic regions Primers Sequence (5'–3') Amplicon (bp) Purpose Reference
Pst I fragment 1-F CTC AAA CAC TCT GGC TCA TC 570 Detection1) Kurita et al. (1998)
1-R GCA CCA ACA CAT CTC CTA TC
DNA polymerase gene 4-F CGG GGG CAA TGA CGA CTA CA 568
4-R CCG CCT GTG CCT TTT CTG GA
Major capsid protein RSIV-MCP1F ATG TCT GCR ATC TCA GGT GC 1,362 Cloning2) Kim et al. (2018)
RSIV-MCP1362R TYA CAG GAT AGG GAA GCC TGC
MqF GGC GAC TAC CTC ATT AAT GT 141 Detection andquantification3) Jin et al. (2014)
MqR CCA CCA GGT CGT TAA ATG A
RSIV 1094F CCA GCA TGC CTG AGA TGG A 128 Detection and quantification4) This study
RSIV 1221R GTC CGA CAC CTT ACA TGA CAG G
RSIV 1177 probe FAM-TAC GGC CGC CTG TCC AAC G-BHQ1
PCR assays for RSIVD in Manual of Diagnostic Tests for Aquatic Animal in OIE.
Construction of standard curve for quantitative analysis.
SYBR Green-based real-time PCR assay.
TaqMan probe-based real-time PCR assay.
RSIV, red sea bream virus; MCP, major capsid protein; RSIV, red sea bream virus; PCR, polymerase chain reaction.